fasta-utils
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http://sourceforge.net/projects/fasta-utils/files/fasta-utils-0.1.tar.gz/download
ABOUT fasta-utils
A set of command-line utilities for annotating and manipulating DNA sequences in FASTA format. Generate restriction fragments, ORF's, translations, reverse complement, etc. . - and tie it all together with Unix pipes for complete virtual cloning.
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