Protein ALignment Optimizer
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http://sourceforge.net/projects/biopalo/files/documentation/documentation.tar.gz/download
ABOUT Protein ALignment Optimizer
Protein ALignment Optimiser (PALO) is a script for the selection and alignment of the best combination of transcripts among orthologous genes. PALO is mainly written in Python, although other programming languages are also implemented (R, Perl...).
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